BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021D11SP1|AL427765
(974 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1497 1228 0.0
>3x_Contig1497
Length = 11582
Score = 1228 bits (619), Expect = 0.0
Identities = 634/639 (99%)
Strand = Plus / Plus
Query: 1 attcttcagcacgttcgtacttcttttgagctctgccaacgtactaagcttgagacttga 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 10642 attcttcagcacgttcgtacttcttttgagctctgccaacgtacaaagcttgagacttga 10701
Query: 61 attccttaccgttcaactcttcaacggccttggcagcggcgttgtggtcaacaaagttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10702 attccttaccgttcaactcttcaacggccttggcagcggcgttgtggtcaacaaagttaa 10761
Query: 121 cgaaaccgaaaccctttggcttaccctcagcatccttttccaaagcagcagagacaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10762 cgaaaccgaaaccctttggcttaccctcagcatccttttccaaagcagcagagacaattt 10821
Query: 181 caccgtattgggagaacaactgttcgaactcttcgtcagtggtttcaacgtcaatgttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10822 caccgtattgggagaacaactgttcgaactcttcgtcagtggtttcaacgtcaatgttct 10881
Query: 241 tgacgtaaatgttggtgaagttagccttggcttcttccaacttggagatacggtccttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10882 tgacgtaaatgttggtgaagttagccttggcttcttccaacttggagatacggtccttct 10941
Query: 301 ttggaacgtgcatggcaacgtaaacttccaaaccgttcatcaacataccgttgacggctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10942 ttggaacgtgcatggcaacgtaaacttccaaaccgttcatcaacataccgttgacggctt 11001
Query: 361 caatagcatccttagcatcggattcttccttgaaatgaacgaaaccgaagcctctagagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11002 caatagcatccttagcatcggattcttccttgaaatgaacgaaaccgaagcctctagagt 11061
Query: 421 ttccattctcatctaaagcaactttacaagacaagacttcaccgaaagtggagaaagttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11062 ttccattctcatctaaagcaactttacaagacaagacttcaccgaaagtggagaaagttt 11121
Query: 481 catgcaaagccttgttgtcaatggctgggtgcaagttcttgatgaaaatgttaccagaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11122 catgcaaagccttgttgtcaatggctgggtgcaagttcttgatgaaaatgttaccagaac 11181
Query: 541 ccttctttctgatagctgggtcacgttcggaccacataattctacatggtctaccgttga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11182 ccttctttctgatagctgggtcacgttcggaccacataattctacatggtctaccgttga 11241
Query: 601 tttcagcatagttcaattcttgaatagctttcttaccag 639
|||||||||||||||| |||||||||| |||||||||
Sbjct: 11242 tttcagcatagttcaaaacttgaatagcaatcttaccag 11280
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8600
Number of Sequences: 1807
Number of extensions: 8600
Number of successful extensions: 448
Number of sequences better than 1.0e-20: 1
length of query: 974
length of database: 10,358,551
effective HSP length: 16
effective length of query: 958
effective length of database: 10,329,639
effective search space: 9895794162
effective search space used: 9895794162
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)